BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014F05LP1|AL426712
(830 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1338 1639 0.0
>3x_Contig1338
Length = 8134
Score = 1639 bits (827), Expect = 0.0
Identities = 829/830 (99%)
Strand = Plus / Minus
Query: 1 gatcactgaagggattatcagaagtnaaggaatcttgagaacggatttcgacatcaaaac 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 6723 gatcactgaagggattatcagaagttaaggaatcttgagaacggatttcgacatcaaaac 6664
Query: 61 ttgatatcgaaacccttttcacatcaacttcggccctgcgtttgtcggaatctgccattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6663 ttgatatcgaaacccttttcacatcaacttcggccctgcgtttgtcggaatctgccattg 6604
Query: 121 ccaaacttttataatgttggtttgctggtttgtaagatctaatgctgtaacaaaattcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6603 ccaaacttttataatgttggtttgctggtttgtaagatctaatgctgtaacaaaattcac 6544
Query: 181 gcttcaaccacaaccatgattgagagcaagatgatcctgattcaatgacagaaatccacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6543 gcttcaaccacaaccatgattgagagcaagatgatcctgattcaatgacagaaatccacg 6484
Query: 241 gtatttgttcactgtttatatatcgtttatttcttaccgattccatgcacaatatgtatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6483 gtatttgttcactgtttatatatcgtttatttcttaccgattccatgcacaatatgtatg 6424
Query: 301 gactttgctgctaaagcatagctgaagaagtattactagtgtaagttggcagtgaaccct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6423 gactttgctgctaaagcatagctgaagaagtattactagtgtaagttggcagtgaaccct 6364
Query: 361 tcggaagtcatcttaggacccttgttattgcctatgaattgtaacagtcaattcaaagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6363 tcggaagtcatcttaggacccttgttattgcctatgaattgtaacagtcaattcaaagag 6304
Query: 421 tcattgaaagactgcatgcaagttggcttgcaaatttcgaaacagagacgagagaccgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6303 tcattgaaagactgcatgcaagttggcttgcaaatttcgaaacagagacgagagaccgta 6244
Query: 481 aaatatcacgaggaatagaccctgatggaaagtactcgtcgacagtctaaagtcattgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6243 aaatatcacgaggaatagaccctgatggaaagtactcgtcgacagtctaaagtcattgtc 6184
Query: 541 ttaaagttacctatatttgtagaaaaagtagagaaggtctttaaacctggggtaagcttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6183 ttaaagttacctatatttgtagaaaaagtagagaaggtctttaaacctggggtaagcttg 6124
Query: 601 catatcgaagacatcacaattaattcagtagacgttcacataaggtaacaattccacaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6123 catatcgaagacatcacaattaattcagtagacgttcacataaggtaacaattccacaga 6064
Query: 661 taccagaaacattggacctttcatttccctggttacaaaatttctttgaacggaagaatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6063 taccagaaacattggacctttcatttccctggttacaaaatttctttgaacggaagaatt 6004
Query: 721 acacagccctaccagagacgaacttctcgacaaaacggctggatcttggttctaacattt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6003 acacagccctaccagagacgaacttctcgacaaaacggctggatcttggttctaacattt 5944
Query: 781 tctttggcgactgcaatttaatgaatcagcgtgtcttccaaaagacataa 830
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5943 tctttggcgactgcaatttaatgaatcagcgtgtcttccaaaagacataa 5894
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5791
Number of Sequences: 1807
Number of extensions: 5791
Number of successful extensions: 21
Number of sequences better than 1.0e-20: 1
length of query: 830
length of database: 10,358,551
effective HSP length: 16
effective length of query: 814
effective length of database: 10,329,639
effective search space: 8408326146
effective search space used: 8408326146
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)